Breakfast Egg Muffins with Bacon

Featured in: Daily Home Cooking

These golden muffins combine six large eggs with savory bacon, sharp cheddar, and diced bell peppers for a protein-rich morning option. The preparation comes together quickly—whisk eggs with milk, fold in your mix-ins, and bake until set. Each muffin delivers 11 grams of protein while staying naturally gluten-free.

Make them on Sunday and enjoy throughout the week. They reheat beautifully in the microwave, making busy mornings simpler without sacrificing nutrition or flavor.

Updated on Sun, 01 Feb 2026 23:35:15 GMT
Golden baked Breakfast Egg Muffins with cheddar, bacon, and bell peppers on a rustic wooden board. Pin it
Golden baked Breakfast Egg Muffins with cheddar, bacon, and bell peppers on a rustic wooden board. | dailyzaafar.com

Sunday mornings used to mean chaos in our kitchen—three people heading three different directions, nobody with time to sit. I started baking these egg muffins in a single tin on autopilot, and suddenly breakfast became something we could grab warm from the counter. The smell of melted cheddar and crispy bacon filling the house made even the earliest risers pause for a second bite. Now I double the batch every week and stash half in the freezer, because some mornings you just need food that loves you back.

I made these for my neighbor after she had surgery, and she texted me at six in the morning asking for the recipe. She said reheating one in the microwave for thirty seconds felt like having a friend cook breakfast for her. That week I learned that food doesnt have to be fancy to feel like care. Sometimes the simplest things, warm and ready when you need them, mean the most.

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Ingredients

  • Large eggs: The foundation of these muffins, whisked until frothy so they bake up light and tender instead of rubbery.
  • Milk: Adds moisture and helps the eggs puff slightly as they bake, creating that soft, custardy center.
  • Shredded cheddar cheese: Melts into golden pockets throughout each muffin and crisps beautifully along the edges.
  • Diced bell peppers: Red, green, or yellow all work, they add color, sweetness, and a slight crunch that balances the richness.
  • Diced onions: Soften as they bake and bring a subtle savory depth that ties everything together.
  • Cooked and crumbled bacon: The smoky, salty backbone of flavor, though sausage or even diced ham work just as well.
  • Salt, black pepper, garlic powder, and paprika: Simple seasonings that wake up the eggs without overpowering the vegetables and cheese.
  • Cooking spray or olive oil: Greasing the tin well is non-negotiable, it ensures the muffins release cleanly and dont stick in stubborn corners.

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Instructions

Preheat and Prep the Tin:
Set your oven to 350°F and generously grease a 12-cup muffin tin with cooking spray or a light brush of olive oil. Dont skip the corners, thats where muffins love to cling.
Whisk the Egg Base:
In a large bowl, whisk the eggs and milk together until the mixture is smooth and slightly frothy, this means youve incorporated enough air for a tender bake. It should look pale yellow and uniform.
Fold in the Fillings:
Stir in the cheddar, bell peppers, onions, bacon, salt, pepper, garlic powder, and paprika until every spoonful looks equally loaded. Mix gently so you dont deflate the eggs.
Fill the Cups:
Pour the mixture into each muffin cup, filling them about two-thirds full to leave room for a slight puff as they bake. Try to distribute the chunky bits evenly so every muffin gets its fair share.
Bake Until Set:
Slide the tin into the oven and bake for 18 to 20 minutes, until the tops are lightly golden and a toothpick poked in the center comes out clean. The edges might pull away slightly from the tin, thats your cue.
Cool and Release:
Let the muffins rest in the tin for 5 minutes to firm up, then run a butter knife gently around each one to loosen. They should pop out easily and hold their shape beautifully.
A close-up of a split Breakfast Egg Muffin revealing fluffy eggs, melted cheese, and savory bacon pieces. Pin it
A close-up of a split Breakfast Egg Muffin revealing fluffy eggs, melted cheese, and savory bacon pieces. | dailyzaafar.com
A close-up of a split Breakfast Egg Muffin revealing fluffy eggs, melted cheese, and savory bacon pieces. Pin it
A close-up of a split Breakfast Egg Muffin revealing fluffy eggs, melted cheese, and savory bacon pieces. | dailyzaafar.com

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One Saturday my kid grabbed two of these on her way to soccer practice and came home asking if we could make them every week. She said her teammates were jealous because all they had were granola bars. That became our Sunday ritual, a dozen muffins cooling on the counter while we planned the week ahead. Food that makes someone feel taken care of, even when youre not there, thats the real win.

How to Store and Reheat

Let the muffins cool completely, then stack them in an airtight container with a square of parchment between layers if youre feeling fancy. They keep in the fridge for up to five days and reheat in the microwave in about 30 seconds, emerging warm and almost as good as fresh. For longer storage, freeze them in a single layer on a baking sheet, then transfer to a freezer bag and thaw overnight in the fridge before reheating.

Customizing Your Muffins

These muffins are wildly forgiving and practically beg to be tweaked based on whats in your fridge. Swap the bacon for cooked sausage, diced ham, or leave it out entirely and add a handful of spinach or sliced mushrooms for a vegetarian version. Try feta or mozzarella instead of cheddar, toss in some diced tomatoes or a pinch of fresh herbs like chives or parsley. The egg base stays the same, the fillings are yours to play with.

Serving Suggestions

We eat these plain most mornings, but they shine with a spoonful of salsa, a drizzle of hot sauce, or a dollop of sour cream on top. Pair them with fresh fruit or a handful of greasy hash browns if youre feeling indulgent. They also pack beautifully for road trips, school lunches, or office breakfasts where you want something warm and real instead of vending machine regret.

  • Serve with a side of avocado slices for creamy richness.
  • Top with a sprinkle of fresh cilantro or green onions for brightness.
  • Pair with a simple mixed greens salad for a light, balanced meal.
Freshly baked Breakfast Egg Muffins served warm with salsa, perfect for a quick handheld breakfast. Pin it
Freshly baked Breakfast Egg Muffins served warm with salsa, perfect for a quick handheld breakfast. | dailyzaafar.com
Freshly baked Breakfast Egg Muffins served warm with salsa, perfect for a quick handheld breakfast. Pin it
Freshly baked Breakfast Egg Muffins served warm with salsa, perfect for a quick handheld breakfast. | dailyzaafar.com

These little muffins prove that the best recipes are the ones that make your life easier without tasting like compromise. Bake a batch, keep them close, and let breakfast be one less thing to worry about.

Recipe Questions & Answers

Can I make these egg muffins ahead of time?

Yes, these muffins are ideal for meal prep. Once completely cooled, store them in an airtight container in the refrigerator for up to 5 days. Reheat individual portions in the microwave for 30-60 seconds until warmed through.

How do I freeze egg muffins?

Allow the muffins to cool completely, then place them in a freezer-safe bag or container. They'll keep well for up to 3 months. Thaw overnight in the refrigerator before reheating, or microwave from frozen with additional time.

What vegetables work well in these muffins?

Bell peppers add sweetness and crunch, but you can substitute spinach, mushrooms, diced tomatoes, or zucchini. Sauté watery vegetables like mushrooms or zucchini first to prevent excess moisture in the final muffins.

Can I make these vegetarian?

Absolutely. Simply omit the bacon and add extra vegetables or a cup of diced cooked potatoes instead. You might also incorporate feta cheese, sun-dried tomatoes, or fresh herbs for additional flavor depth.

Why do my egg muffins sometimes collapse?

Overfilling the muffin cups can cause collapse during cooling. Fill each cup only about two-thirds full to allow room for rising. Also, letting them cool in the pan for the full 5 minutes helps set the structure before removing.

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Breakfast Egg Muffins with Bacon

Handheld breakfast with eggs, bacon, cheddar, and vegetables. Quick to make and easy to reheat.

Prep Time
10 min
Cook Time
20 min
Time Needed
30 min
Created by Cole Armstrong


Skill Level Easy

Cuisine American

Makes 6 Servings

Diet Preferences Gluten-Free, Low-Carb

Ingredient List

Eggs & Dairy

01 6 large eggs
02 1/2 cup whole milk
03 1/2 cup shredded cheddar cheese

Vegetables

01 1/2 cup diced bell peppers (red, green, or yellow)
02 1/2 cup diced onions

Proteins

01 1/2 cup cooked and crumbled bacon

Seasonings

01 1/2 teaspoon salt
02 1/4 teaspoon black pepper
03 1/4 teaspoon garlic powder
04 1/4 teaspoon paprika

For Greasing

01 Cooking spray or olive oil for muffin tin

How-To Steps

Step 01

Preheat Oven: Preheat oven to 350°F (175°C).

Step 02

Prepare Muffin Tin: Grease a standard 12-cup muffin tin with cooking spray or olive oil.

Step 03

Combine Wet Ingredients: In a large bowl, whisk together eggs and milk until well combined and slightly frothy.

Step 04

Mix Filling: Stir in cheddar cheese, bell peppers, onions, bacon, salt, black pepper, garlic powder, and paprika until evenly mixed.

Step 05

Fill Muffin Cups: Pour the mixture into the prepared muffin tin, filling each cup approximately 2/3 full.

Step 06

Bake: Bake for 18 to 20 minutes, or until muffins are set and lightly golden. A toothpick inserted in the center should come out clean.

Step 07

Cool and Remove: Remove from oven and let cool for 5 minutes. Carefully loosen muffins with a knife if needed and remove from tin.

Step 08

Serve or Store: Serve warm, or cool completely and store in an airtight container in the refrigerator for up to 5 days. Reheat in the microwave before serving.

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What You’ll Need

  • 12-cup muffin tin
  • Mixing bowl
  • Whisk
  • Measuring cups and spoons
  • Knife and cutting board

Allergy Alerts

Review every ingredient for possible allergy risks, and talk to a health expert if unsure.
  • Contains eggs and dairy
  • May contain pork depending on protein choice
  • Verify gluten-free status of sausage or other add-ins

Nutrition Details (per serving)

For informational purposes only. Not medical advice.
  • Calories: 150
  • Fats: 10 g
  • Carbohydrates: 2 g
  • Protein: 11 g

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